C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thyroid hormone receptor interactor 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000019631 Trip10-201 ENSMUSG00000019487 10090 + 17:57249451-57263697 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000019631
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000019631 15.870±2.33 6.771±2.97 28.854±0.51 2.976±0.61 11.094±4.68 21.356±4.26 18.485±2.04 12.883±1.41 4.120±2.50 19.180±4.13 29.554±4.84 12.685±7.61 8.856±1.62 1.617±0.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006IY CIL_0006IY_0002 CGP 17:57234914-57263697

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005764 IEA lysosome
GO:0005794 IEA Golgi apparatus
GO:0005874 TAS microtubule
GO:0005886 IEA plasma membrane
GO:0006897 IEA endocytosis
GO:0008289 IEA lipid binding
GO:0030036 IEA actin cytoskeleton organization
GO:0042802 IEA identical protein binding
GO:0042995 IEA cell projection
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000313244 TRIP10-003 protein_coding Homo_sapiens 0 1009
ENST00000313285 TRIP10-001 protein_coding Homo_sapiens 0 1659
ENST00000595305 TRIP10-004 retained_intron Homo_sapiens 0 1308
ENST00000596758 TRIP10-005 protein_coding Homo_sapiens 0 1360
ENST00000600428 TRIP10-014 protein_coding Homo_sapiens 0 1613
ENST00000600491 TRIP10-010 retained_intron Homo_sapiens 0 966
ENST00000600677 TRIP10-013 nonsense_mediated_decay Homo_sapiens 0 1009

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