C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial translational release factor 1-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000019908 Mtrf1l-001 ENSMUSG00000019774 10090 - 10:5811887-5823910 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000019908
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000019908 0.420±0.14 5.136±0.45 0.919±0.03 0.776±0.38 0.878±0.23 0.968±0.56 0.288±0.08 0.843±0.29 0.704±0.34 0.819±0.08 1.203±0.20 1.529±1.11 1.527±0.51 0.360±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005EJ CIL_0005EJ_0002 CGP 10:5799160-5823910
CIL_0005EK CIL_0005EK_0002 CGP 10:5811887-5922400

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0006415 IEA translational termination
GO:0016149 IEA translation release factor activity, codon specific

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000367230 MTRF1L-006 protein_coding Homo_sapiens 0 195
ENST00000367231 MTRF1L-005 protein_coding Homo_sapiens 0 636
ENST00000367233 MTRF1L-003 protein_coding Homo_sapiens 0 933
ENST00000414771 MTRF1L-007 protein_coding Homo_sapiens 0 595
ENST00000461949 MTRF1L-001 processed_transcript Homo_sapiens 0 303
ENST00000464135 MTRF1L-004 processed_transcript Homo_sapiens 0 782
ENST00000485512 MTRF1L-010 processed_transcript Homo_sapiens 0 484
ENST00000504731 RP11-756P10.3-001 processed_pseudogene Homo_sapiens 0 894
ENST00000506027 MTRF1LP2-001 processed_pseudogene Homo_sapiens 0 625

Loading