C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ARP6 actin-related protein 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020109 Actr6-201 ENSMUSG00000019948 10090 - 10:89711973-89732295 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020109
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020109 1.312±0.27 0.738±0.24 5.274±1.21 7.924±2.86 1.180±0.18 0.632±0.25 1.557±0.58 1.247±0.29 3.460±2.38 1.123±0.33 2.462±0.15 1.673±1.79 5.790±1.26 5.168±0.61

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000188312 ACTR6-001 protein_coding Homo_sapiens 0 1572
ENST00000546902 ACTR6-003 protein_coding Homo_sapiens 0 1465
ENST00000547458 ACTR6-010 nonsense_mediated_decay Homo_sapiens 0 555
ENST00000548180 ACTR6-006 nonsense_mediated_decay Homo_sapiens 0 1507
ENST00000549977 ACTR6-007 retained_intron Homo_sapiens 0 555
ENST00000550813 ACTR6-012 processed_transcript Homo_sapiens 0 372
ENST00000551440 ACTR6-009 retained_intron Homo_sapiens 0 267
ENST00000551517 ACTR6-011 retained_intron Homo_sapiens 0 499
ENST00000551617 ACTR6-004 protein_coding Homo_sapiens 0 1085
ENST00000551652 ACTR6-013 protein_coding Homo_sapiens 0 636
ENST00000552064 ACTR6-008 nonsense_mediated_decay Homo_sapiens 0 492
ENST00000552376 ACTR6-005 protein_coding Homo_sapiens 0 1184
ENST00000553038 ACTR6-002 nonsense_mediated_decay Homo_sapiens 0 558

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