C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Hbs1-like (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020153 Hbs1l-201 ENSMUSG00000019977 10090 + 10:21295979-21368889 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020153
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020153 4.870±0.53 3.104±1.02 6.867±1.02 7.867±0.49 2.735±0.65 3.022±1.17 5.801±0.55 6.016±1.18 8.314±3.70 4.151±0.47 18.029±0.76 5.351±5.17 18.714±6.72 25.407±5.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AJ CIL_0009AJ_0002 VISTA 10:20781770-21384133

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003746 IEA translation elongation factor activity
GO:0003924 IEA GTPase activity
GO:0005525 ISS GTP binding
GO:0006184 IEA GTP catabolic process
GO:0006414 IEA translational elongation
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314674 HBS1L-003 protein_coding Homo_sapiens 0 339
ENST00000367820 HBS1L-014 protein_coding Homo_sapiens 0 339
ENST00000367822 HBS1L-004 protein_coding Homo_sapiens 0 381
ENST00000367826 HBS1L-006 protein_coding Homo_sapiens 0 1964
ENST00000367837 HBS1L-001 protein_coding Homo_sapiens 0 2170
ENST00000415177 HBS1L-007 protein_coding Homo_sapiens 0 1799
ENST00000524715 HBS1L-013 protein_coding Homo_sapiens 0 276
ENST00000525067 HBS1L-012 protein_coding Homo_sapiens 1.99965e-42 176
ENST00000526100 HBS1L-008 nonsense_mediated_decay Homo_sapiens 0 1591
ENST00000527005 HBS1L-005 retained_intron Homo_sapiens 0.00000007 64
ENST00000527507 HBS1L-015 protein_coding Homo_sapiens 0 442
ENST00000527578 HBS1L-010 protein_coding Homo_sapiens 0 1796
ENST00000529169 HBS1L-017 protein_coding Homo_sapiens 0 516
ENST00000529641 HBS1L-016 protein_coding Homo_sapiens 0 826
ENST00000529882 HBS1L-011 protein_coding Homo_sapiens 0 294
ENST00000533274 HBS1L-009 protein_coding Homo_sapiens 0 1803

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