C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TBC1 domain family, member 15
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020339 Tbc1d15-201 ENSMUSG00000020130 10090 - 10:115197877-115251493 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020339
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020339 6.263±1.23 3.456±1.38 13.559±1.66 5.429±0.77 4.443±1.15 6.269±1.02 3.341±0.25 4.362±1.09 7.207±3.03 6.379±0.76 3.562±1.50 7.871±3.24 13.887±4.36 14.426±3.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003CY CIL_0003CY_0002 CGP 10:115078641-115251493

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005097 IDA Rab GTPase activator activity
GO:0005515 IEA protein binding
GO:0005576 IDA extracellular region
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0032313 IDA regulation of Rab GTPase activity
GO:0032851 IEA positive regulation of Rab GTPase activity
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000319106 TBC1D15-013 protein_coding Homo_sapiens 0 2276
ENST00000460818 TBC1D15-009 processed_transcript Homo_sapiens 0 556
ENST00000462788 TBC1D15-003 nonsense_mediated_decay Homo_sapiens 0 1788
ENST00000468049 TBC1D15-014 nonsense_mediated_decay Homo_sapiens 0 337
ENST00000472611 TBC1D15-007 nonsense_mediated_decay Homo_sapiens 0 501
ENST00000474468 TBC1D15-006 processed_transcript Homo_sapiens 0 401
ENST00000479971 TBC1D15-012 retained_intron Homo_sapiens 0 233
ENST00000482439 TBC1D15-005 protein_coding Homo_sapiens 0 741
ENST00000483828 TBC1D15-011 retained_intron Homo_sapiens 0 604
ENST00000485960 TBC1D15-002 protein_coding Homo_sapiens 0 2772
ENST00000491063 TBC1D15-004 protein_coding Homo_sapiens 0 1295
ENST00000498482 TBC1D15-010 nonsense_mediated_decay Homo_sapiens 0 486
ENST00000546450 TBC1D15-018 retained_intron Homo_sapiens 0 813
ENST00000546932 TBC1D15-015 processed_transcript Homo_sapiens 0 394
ENST00000548679 TBC1D15-017 processed_transcript Homo_sapiens 0 316
ENST00000549402 TBC1D15-016 processed_transcript Homo_sapiens 0 403
ENST00000550746 TBC1D15-001 protein_coding Homo_sapiens 0 2410

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