C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NADH dehydrogenase (ubiquinone) Fe-S protein 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020361 Ndufs7-201 ENSMUSG00000020153 10090 + 10:80249452-80256792 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020361
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020361 212.325±64.03 482.206±62.12 156.164±28.60 107.934±51.09 370.708±47.72 348.841±30.72 647.825±208.69 403.824±19.06 196.565±36.49 180.546±21.63 331.641±15.11 205.185±102.41 87.565±33.24 44.053±21.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000QX CIL_0000QX_0002 CGP 10:80226434-80256794
CIL_0005ZH CIL_0005ZH_0003 CGP 10:80249121-80261012

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003954 ISS NADH dehydrogenase activity
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0005747 ISS mitochondrial respiratory chain complex I
GO:0008137 IEA NADH dehydrogenase (ubiquinone) activity
GO:0032981 ISS mitochondrial respiratory chain complex I assembly
GO:0046872 IEA metal ion binding
GO:0048038 IEA quinone binding
GO:0051539 IEA 4 iron, 4 sulfur cluster binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000233627 NDUFS7-002 protein_coding Homo_sapiens 0 496
ENST00000313408 NDUFS7-020 protein_coding Homo_sapiens 0 398
ENST00000436115 NDUFS7-007 retained_intron Homo_sapiens 3e-17 95
ENST00000538662 NDUFS7-006 retained_intron Homo_sapiens 0 265
ENST00000539480 NDUFS7-005 protein_coding Homo_sapiens 0 398
ENST00000543289 NDUFS7-004 retained_intron Homo_sapiens 0.0000004 62
ENST00000545446 NDUFS7-003 retained_intron Homo_sapiens 9e-18 97
ENST00000546283 NDUFS7-001 protein_coding Homo_sapiens 0 398
ENST00000618074 NDUFS7-201 protein_coding Homo_sapiens 0 425

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