C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adaptor-related protein complex 3, delta 1 subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020420 Ap3d1-201 ENSMUSG00000020198 10090 - 10:80706978-80742211 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020420
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020420 46.886±3.60 36.282±6.23 31.329±4.43 45.923±7.61 42.100±5.58 35.743±7.53 12.454±2.51 27.701±2.88 15.715±3.64 30.328±4.61 8.103±1.14 38.931±14.49 24.265±13.27 44.323±14.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00009F CIL_00009F_0002 CGP 10:80702693-80742211
CIL_00009C CIL_00009C_0002 CGP 10:80706978-80795461

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005765 IEA lysosomal membrane
GO:0005802 TAS trans-Golgi network
GO:0006829 TAS zinc ion transport
GO:0006886 IMP intracellular protein transport
GO:0008089 IMP anterograde axon cargo transport
GO:0008565 IEA protein transporter activity
GO:0010008 IDA endosome membrane
GO:0016020 IEA membrane
GO:0016192 TAS vesicle-mediated transport
GO:0019882 IMP antigen processing and presentation
GO:0030117 IEA membrane coat
GO:0030424 IDA axon
GO:0033365 IMP protein localization to organelle
GO:0035646 IEA endosome to melanosome transport
GO:0043195 IDA terminal bouton
GO:0048007 IMP antigen processing and presentation, exogenous lipid antigen via MHC class Ib
GO:0048490 IMP anterograde synaptic vesicle transport
GO:0048499 IMP synaptic vesicle membrane organization
GO:0051138 IMP positive regulation of NK T cell differentiation
GO:0061088 TAS regulation of sequestering of zinc ion
GO:0072657 IEA protein localization to membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000345016 AP3D1-002 protein_coding Homo_sapiens 0 2891
ENST00000355272 AP3D1-001 protein_coding Homo_sapiens 0 3531
ENST00000585652 AP3D1-005 retained_intron Homo_sapiens 0 313
ENST00000586370 AP3D1-011 protein_coding Homo_sapiens 0 224
ENST00000589223 AP3D1-006 retained_intron Homo_sapiens 0 652
ENST00000590683 AP3D1-014 nonsense_mediated_decay Homo_sapiens 0 586
ENST00000591284 AP3D1-013 processed_transcript Homo_sapiens 0 318
ENST00000591631 AP3D1-009 processed_transcript Homo_sapiens 0 383
ENST00000591650 AP3D1-007 retained_intron Homo_sapiens 0 680

Loading