C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DnaJ (Hsp40) homolog, subfamily C, member 27
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020986 Dnajc27-201 ENSMUSG00000020657 10090 + 12:4082574-4110612 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020986
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020986 3.138±1.42 3.321±0.49 4.001±0.17 11.752±6.25 3.715±1.33 0.900±0.17 3.036±0.89 1.049±0.38 0.577±0.44 3.466±0.09 17.162±1.17 3.494±1.83 1.420±0.61 35.438±13.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000739 CIL_000739_0002 CGP 12:3962554-4110612

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IDA GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005634 IDA nucleus
GO:0005739 IDA mitochondrion
GO:0006184 IDA GTP catabolic process
GO:0007264 IEA small GTPase mediated signal transduction
GO:0043410 IDA positive regulation of MAPK cascade
GO:0070374 IDA positive regulation of ERK1 and ERK2 cascade
GO:0071701 IDA regulation of MAPK export from nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264711 DNAJC27-001 protein_coding Homo_sapiens 0 1223
ENST00000380809 DNAJC27-002 nonsense_mediated_decay Homo_sapiens 0 433
ENST00000492985 DNAJC27-007 retained_intron Homo_sapiens 0 303
ENST00000494239 DNAJC27-005 processed_transcript Homo_sapiens 0 627
ENST00000534855 DNAJC27-201 protein_coding Homo_sapiens 0 791

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