C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: kinesin family member 3C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020999 Kif3c-201 ENSMUSG00000020668 10090 + 12:3365132-3406494 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000020999
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000020999 2.149±0.84 8.383±1.91 3.245±0.00 16.891±6.82 3.087±0.70 1.491±0.17 1.178±0.13 1.920±0.40 0.484±0.00 2.451±0.95 7.246±2.73 6.487±1.40 2.716±0.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000DF CIL_0000DF_0002 CGP 12:3247430-3406494

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003777 IBA microtubule motor activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005829 TAS cytosol
GO:0005871 IBA kinesin complex
GO:0005874 ISO microtubule
GO:0006200 IBA ATP catabolic process
GO:0008017 IEA microtubule binding
GO:0008152 IBA metabolic process
GO:0016887 IBA ATPase activity
GO:0043025 ISO neuronal cell body
GO:0071598 ISO neuronal ribonucleoprotein granule
GO:0072384 IMP organelle transport along microtubule

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264712 KIF3C-001 protein_coding Homo_sapiens 0 3567
ENST00000405914 KIF3C-002 protein_coding Homo_sapiens 0 3214
ENST00000417737 KIF3C-003 nonsense_mediated_decay Homo_sapiens 0 3094
ENST00000455394 KIF3C-004 nonsense_mediated_decay Homo_sapiens 0 3094
ENST00000475453 KIF3C-006 retained_intron Homo_sapiens 0 785
ENST00000488341 KIF3C-005 retained_intron Homo_sapiens 0 601
ENST00000496378 KIF3C-007 processed_transcript Homo_sapiens 0 374
ENST00000614152 KIF3C-201 protein_coding Homo_sapiens 0 3182

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