C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, H+ transporting, lysosomal V1 subunit D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021536 Atp6v1d-201 ENSMUSG00000021114 10090 - 12:78842989-78861638 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021536
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021536 14.458±0.80 6.353±0.24 31.812±1.07 67.319±54.01 14.380±5.56 6.599±1.18 25.298±0.84 34.955±3.41 12.473±5.05 12.959±2.25 34.007±1.24 15.939±14.37 44.447±15.91 43.877±28.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00010H CIL_00010H_0002 CGP 12:78748947-78861638
CIL_0001KG CIL_0001KG_0003 CGP 12:78842989-78887010

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005765 IEA lysosomal membrane
GO:0005813 ISS centrosome
GO:0005929 ISS cilium
GO:0015992 IEA proton transport
GO:0016020 IEA membrane
GO:0016471 IEA vacuolar proton-transporting V-type ATPase complex
GO:0042384 ISS cilium assembly
GO:0042626 IEA ATPase activity, coupled to transmembrane movement of substances
GO:0055085 IEA transmembrane transport
GO:0061512 ISS protein localization to cilium
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216442 ATP6V1D-001 protein_coding Homo_sapiens 0 1123
ENST00000553687 ATP6V1D-006 protein_coding Homo_sapiens 0 278
ENST00000554087 ATP6V1D-004 nonsense_mediated_decay Homo_sapiens 0 1033
ENST00000554236 ATP6V1D-013 protein_coding Homo_sapiens 0 671
ENST00000555012 ATP6V1D-005 protein_coding Homo_sapiens 0 377
ENST00000555335 ATP6V1D-007 retained_intron Homo_sapiens 0 470
ENST00000555431 ATP6V1D-014 protein_coding Homo_sapiens 0 791
ENST00000555474 ATP6V1D-002 protein_coding Homo_sapiens 0 291
ENST00000555625 ATP6V1D-011 nonsense_mediated_decay Homo_sapiens 0 606
ENST00000555723 ATP6V1D-015 protein_coding Homo_sapiens 0 433
ENST00000556058 ATP6V1D-009 nonsense_mediated_decay Homo_sapiens 0 379
ENST00000557244 ATP6V1D-008 retained_intron Homo_sapiens 0 259

Loading