C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubulin, alpha-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021639 Tubal3-201 ENSMUSG00000021216 10090 + 13:3924695-3935276 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartLiverLungOvaryPlacentaTestisENSMUST00000021639
Transcript ID Adipose Brain Breast Colon Heart Liver Lung Ovary Placenta Testis
ENSMUST00000021639 0.029±0.01 0.007±0.00 0.023±0.00 2.024±1.49 0.009±0.00 0.012±0.01 0.032±0.01 0.114±0.06 0.595±0.76 0.431±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HB CIL_0008HB_0002 VISTA 13:3426204-4027216
CIL_00097T CIL_00097T_0002 VISTA 13:3441069-4044545

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005200 IEA structural constituent of cytoskeleton
GO:0005525 IEA GTP binding
GO:0005737 IEA cytoplasm
GO:0005874 IEA microtubule
GO:0006184 IEA GTP catabolic process
GO:0007017 IEA microtubule-based process
GO:0051258 IEA protein polymerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000380419 TUBAL3-001 protein_coding Homo_sapiens 0 1146
ENST00000479328 TUBAL3-002 protein_coding Homo_sapiens 0 1014

Loading