C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coenzyme Q6 homolog (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021661 Coq6-201 ENSMUSG00000021235 10090 + 12:84361968-84373796 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021661
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021661 29.751±3.60 26.835±4.26 11.498±1.04 16.860±1.90 27.360±8.70 15.370±2.39 42.459±3.80 22.157±1.86 14.640±5.06 11.388±4.67 11.524±0.83 18.256±8.06 9.176±4.35 5.022±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089E CIL_00089E_0002 VISTA 12:83875691-84476743
CIL_0001TK CIL_0001TK_0002 CGP 12:84316859-84361833
CIL_0002WH CIL_0002WH_0003 CGP 12:84345309-84373796
CIL_0002U9 CIL_0002U9_0003 CGP 12:84361657-84409029

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0005794 IEA Golgi apparatus
GO:0006744 IEA ubiquinone biosynthetic process
GO:0008150 ND biological_process
GO:0016709 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen
GO:0042995 IEA cell projection
GO:0050660 IEA flavin adenine dinucleotide binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000238709 COQ6-201 protein_coding Homo_sapiens 0 1519
ENST00000334571 COQ6-001 protein_coding Homo_sapiens 0 1520
ENST00000394026 COQ6-008 protein_coding Homo_sapiens 0 1434
ENST00000553448 COQ6-020 retained_intron Homo_sapiens 0 340
ENST00000553462 COQ6-004 retained_intron Homo_sapiens 0 219
ENST00000553922 COQ6-002 retained_intron Homo_sapiens 0 230
ENST00000554153 COQ6-013 nonsense_mediated_decay Homo_sapiens 0 261
ENST00000554193 COQ6-014 retained_intron Homo_sapiens 0 438
ENST00000554217 COQ6-011 retained_intron Homo_sapiens 0 261
ENST00000554320 COQ6-012 protein_coding Homo_sapiens 0 712
ENST00000554341 COQ6-007 nonsense_mediated_decay Homo_sapiens 0 1171
ENST00000554920 COQ6-019 protein_coding Homo_sapiens 0 438
ENST00000555196 COQ6-005 nonsense_mediated_decay Homo_sapiens 0 351
ENST00000555392 COQ6-010 retained_intron Homo_sapiens 2e-40 171
ENST00000555511 COQ6-015 retained_intron Homo_sapiens 0 721
ENST00000555552 COQ6-016 processed_transcript Homo_sapiens 0 438
ENST00000556300 COQ6-017 retained_intron Homo_sapiens 0 577
ENST00000556588 COQ6-009 retained_intron Homo_sapiens 0 237
ENST00000557205 COQ6-018 retained_intron Homo_sapiens 0 261
ENST00000557325 ENTPD5-004 protein_coding Homo_sapiens 3e-23 115
ENST00000557584 COQ6-006 nonsense_mediated_decay Homo_sapiens 0 483

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