C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adenylosuccinate synthetase like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021726 Adssl1-201 ENSMUSG00000011148 10090 + 12:112620047-112641354 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021726
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021726 1.316±0.35 5.476±2.19 10.888±2.70 3.884±4.20 22.039±21.02 0.533±0.14 31.436±6.06 3.585±1.14 8.203±2.11 11.050±1.29 528.420±16.02 1.325±0.54 7.799±3.30 0.297±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006XC CIL_0006XC_0002 CGP 12:112588784-112641354
CIL_00059G CIL_00059G_0003 CGP 12:112620045-112649152

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0003924 IEA GTPase activity
GO:0004019 IDA adenylosuccinate synthase activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005737 IDA cytoplasm
GO:0006163 IDA purine nucleotide metabolic process
GO:0006167 IEA AMP biosynthetic process
GO:0006184 IEA GTP catabolic process
GO:0006531 IEA aspartate metabolic process
GO:0006541 IEA glutamine metabolic process
GO:0009168 IEA purine ribonucleoside monophosphate biosynthetic process
GO:0014850 IEA response to muscle activity
GO:0016020 IEA membrane
GO:0035690 IEA cellular response to drug
GO:0042594 IEA response to starvation
GO:0042803 IEA protein homodimerization activity
GO:0044208 IEA 'de novo' AMP biosynthetic process
GO:0046040 IEA IMP metabolic process
GO:0051015 IEA actin filament binding
GO:0071257 IEA cellular response to electrical stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330877 ADSSL1-001 protein_coding Homo_sapiens 0 1777
ENST00000332972 ADSSL1-002 protein_coding Homo_sapiens 0 1415
ENST00000553540 ADSSL1-003 nonsense_mediated_decay Homo_sapiens 0 1327
ENST00000553580 ADSSL1-009 retained_intron Homo_sapiens 0 309
ENST00000554281 ADSSL1-007 retained_intron Homo_sapiens 0 254
ENST00000554657 ADSSL1-012 processed_transcript Homo_sapiens 0 324
ENST00000555486 ADSSL1-005 nonsense_mediated_decay Homo_sapiens 0 680
ENST00000555674 ADSSL1-010 protein_coding Homo_sapiens 9.80909e-45 183
ENST00000555884 ADSSL1-008 retained_intron Homo_sapiens 0 324
ENST00000556623 ADSSL1-011 protein_coding Homo_sapiens 0 248
ENST00000557271 ADSSL1-006 retained_intron Homo_sapiens 0 246
ENST00000557582 ADSSL1-004 retained_intron Homo_sapiens 0 1203

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