C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nucleolar protein 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021824 Nol8-201 ENSMUSG00000021392 10090 + 13:49653350-49679015 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000021824
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021824 0.462±0.00 0.223±0.05 3.220±0.73 2.582±1.17 0.520±0.26 0.416±0.18 0.809±0.00 1.771±1.13 0.444±0.19 0.878±0.32 1.711±2.37 4.812±3.49 15.046±11.96

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005730 ISS nucleolus
GO:0005737 IEA cytoplasm
GO:0006260 IEA DNA replication
GO:0006364 ISS rRNA processing
GO:0030307 IEA positive regulation of cell growth
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000358855 NOL8-201 protein_coding Homo_sapiens 0 1195
ENST00000360868 NOL8-003 nonsense_mediated_decay Homo_sapiens 0 1195
ENST00000411621 NOL8-020 protein_coding Homo_sapiens 0 556
ENST00000421075 NOL8-007 protein_coding Homo_sapiens 0 750
ENST00000432670 NOL8-004 protein_coding Homo_sapiens 0 852
ENST00000433029 NOL8-013 protein_coding Homo_sapiens 0 750
ENST00000434228 NOL8-005 nonsense_mediated_decay Homo_sapiens 0 723
ENST00000442668 NOL8-006 protein_coding Homo_sapiens 0 1195
ENST00000445919 NOL8-028 nonsense_mediated_decay Homo_sapiens 0 405
ENST00000467230 NOL8-011 retained_intron Homo_sapiens 0 255
ENST00000508336 NOL8P1-001 processed_pseudogene Homo_sapiens 0 948
ENST00000535387 NOL8-010 protein_coding Homo_sapiens 0 743
ENST00000535807 NOL8-018 protein_coding Homo_sapiens 0 412
ENST00000536593 NOL8-016 nonsense_mediated_decay Homo_sapiens 0 1195
ENST00000538802 NOL8-029 retained_intron Homo_sapiens 0 220
ENST00000542053 NOL8-008 protein_coding Homo_sapiens 0 1162
ENST00000544867 NOL8-017 nonsense_mediated_decay Homo_sapiens 0 957
ENST00000545444 NOL8-012 nonsense_mediated_decay Homo_sapiens 0 800
ENST00000545558 NOL8-015 protein_coding Homo_sapiens 0 1195

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