C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PRELI domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021942 Prelid1-201 ENSMUSG00000021486 10090 + 13:55322055-55325271 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021942
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021942 147.445±3.49 190.983±16.52 114.305±6.48 127.804±9.91 153.613±55.06 335.450±22.42 32.181±4.28 290.687±21.40 183.401±17.31 115.936±14.73 10.326±1.24 156.789±26.18 313.964±62.22 18.888±6.99

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A2 CIL_0008A2_0002 VISTA 13:55104361-55707564
CIL_0000YS CIL_0000YS_0002 CGP 13:55322055-55329758

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005739 IDA mitochondrion
GO:0005758 ISS mitochondrial intermembrane space
GO:0010917 ISS negative regulation of mitochondrial membrane potential
GO:0010950 ISS positive regulation of endopeptidase activity
GO:0015914 IBA phospholipid transport
GO:0043066 IMP negative regulation of apoptotic process
GO:0043234 ISS protein complex
GO:0045580 ISS regulation of T cell differentiation
GO:0051881 ISS regulation of mitochondrial membrane potential
GO:0070234 ISS positive regulation of T cell apoptotic process
GO:0090201 ISS negative regulation of release of cytochrome c from mitochondria
GO:0097035 ISS regulation of membrane lipid distribution
GO:1901857 ISS positive regulation of cellular respiration
GO:1990050 IBA phosphatidic acid transporter activity
GO:2001140 ISS positive regulation of phospholipid transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000303204 PRELID1-001 protein_coding Homo_sapiens 0 1007
ENST00000403549 PRELID1P1-001 transcribed_processed_pseudogene Homo_sapiens 0 918
ENST00000427908 MXD3-003 protein_coding Homo_sapiens 4.2039e-45 187
ENST00000431591 RP11-543B16.2-001 processed_pseudogene Homo_sapiens 0 928
ENST00000436998 AC016734.2-001 processed_pseudogene Homo_sapiens 0 913
ENST00000450055 PRELID1P3-001 processed_pseudogene Homo_sapiens 0 773
ENST00000502670 PRELID1-004 processed_transcript Homo_sapiens 0 333
ENST00000503216 PRELID1-002 protein_coding Homo_sapiens 0 824
ENST00000503853 PRELID1-006 protein_coding Homo_sapiens 0 532
ENST00000504594 PRELID1-005 nonsense_mediated_decay Homo_sapiens 0 544
ENST00000510701 PRELID1-008 retained_intron Homo_sapiens 0 274
ENST00000510797 PRELID1-003 nonsense_mediated_decay Homo_sapiens 0 597
ENST00000511309 PRELID1-007 retained_intron Homo_sapiens 0 725
ENST00000561466 PRELID1P4-001 processed_pseudogene Homo_sapiens 0 662
ENST00000567272 PRELID1P1-002 processed_transcript Homo_sapiens 0 972

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