C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PIN2/TERF1 interacting, telomerase inhibitor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000022528 Pinx1-201 ENSMUSG00000021958 10090 + 14:63860312-63919859 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022528
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022528 1.010±0.57 0.837±0.22 4.342±0.15 3.806±0.71 0.614±0.31 1.025±0.33 0.487±0.17 1.058±0.15 2.856±1.86 0.903±0.28 1.097±0.29 2.222±3.09 4.005±1.62 3.659±4.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006Q1 CIL_0006Q1_0002 CGP 14:63860312-63950732

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000228 IEA nuclear chromosome
GO:0000776 IEA kinetochore
GO:0000781 IDA chromosome, telomeric region
GO:0005515 IPI protein binding
GO:0005730 IDA nucleolus
GO:0005819 IEA spindle
GO:0007004 IDA telomere maintenance via telomerase
GO:0007080 IEA mitotic metaphase plate congression
GO:0070034 IEA telomeric RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314787 PINX1-001 protein_coding Homo_sapiens 0 632
ENST00000519088 PINX1-002 protein_coding Homo_sapiens 0 503
ENST00000523559 PINX1-009 nonsense_mediated_decay Homo_sapiens 0 499
ENST00000524026 PINX1-004 retained_intron Homo_sapiens 3e-36 156
ENST00000524114 PINX1-006 protein_coding Homo_sapiens 0 547
ENST00000554914 SOX7-001 protein_coding Homo_sapiens 0 503

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