C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: exportin 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000022696 Xpo7-201 ENSMUSG00000022100 10090 - 14:70654246-70766628 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022696
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022696 5.042±2.47 6.099±0.76 2.175±1.65 3.981±2.29 5.834±0.87 3.838±0.75 1.906±0.65 5.203±1.74 6.578±3.87 4.708±1.09 1.360±0.78 7.595±3.26 3.516±1.32 0.767±0.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000812 CIL_000812_0002 VISTA 14:70334498-70935318
CIL_0008ZI CIL_0008ZI_0002 VISTA 14:70339990-70941193
CIL_000810 CIL_000810_0002 VISTA 14:70383794-70984839

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005049 IEA nuclear export signal receptor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005643 IEA nuclear pore
GO:0005737 IEA cytoplasm
GO:0006611 IEA protein export from nucleus
GO:0006886 IEA intracellular protein transport
GO:0006913 TAS nucleocytoplasmic transport
GO:0008536 TAS Ran GTPase binding
GO:0051028 IEA mRNA transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000027612 xpo7-201 protein_coding Danio_rerio 0 2497
ENSDART00000145264 xpo7-001 protein_coding Danio_rerio 0 2442
ENST00000252512 XPO7-001 protein_coding Homo_sapiens 0 6113
ENST00000433566 XPO7-003 protein_coding Homo_sapiens 0 5613
ENST00000517551 XPO7-012 protein_coding Homo_sapiens 0 1013
ENST00000518017 XPO7-002 processed_transcript Homo_sapiens 0 1016
ENST00000519769 XPO7-007 retained_intron Homo_sapiens 0 385
ENST00000520754 XPO7-006 processed_transcript Homo_sapiens 0 215
ENST00000521303 XPO7-008 protein_coding Homo_sapiens 0 721
ENST00000522015 XPO7-014 retained_intron Homo_sapiens 0 270

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