C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Shc SH2-domain binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000022945 Shcbp1-201 ENSMUSG00000022322 10090 - 8:4735980-4779534 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022945
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022945 0.608±0.56 0.161±0.05 0.470±0.12 2.132±1.56 0.200±0.08 0.598±0.11 0.083±0.03 0.292±0.12 7.106±6.63 0.174±0.12 0.058±0.02 1.030±1.02 7.984±5.57 12.481±3.88

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005575 ND cellular_component
GO:0008543 IMP fibroblast growth factor receptor signaling pathway
GO:0042169 IDA SH2 domain binding
GO:2000177 IMP regulation of neural precursor cell proliferation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000303383 SHCBP1-001 protein_coding Homo_sapiens 0 1840
ENST00000563219 SHCBP1-006 retained_intron Homo_sapiens 0 353
ENST00000565887 SHCBP1-004 retained_intron Homo_sapiens 0 507
ENST00000566016 SHCBP1-002 retained_intron Homo_sapiens 0 989
ENST00000569702 SHCBP1-005 protein_coding Homo_sapiens 0 309

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