C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HGH1 homolog
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023213 Fam203a-201 ENSMUSG00000022554 10090 + 15:76368898-76371403 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023213
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023213 4.901±1.91 6.723±2.18 4.961±1.50 6.621±4.14 4.420±2.03 3.326±0.88 2.204±0.41 4.083±0.54 5.572±3.43 3.655±0.37 0.645±0.29 7.809±3.27 4.231±2.15 10.915±5.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SS CIL_0007SS_0002 VISTA 15:76102685-76704351

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000347708 HGH1-001 protein_coding Homo_sapiens 0 893
ENST00000525101 HGH1-006 retained_intron Homo_sapiens 0 268
ENST00000533266 HGH1-003 nonsense_mediated_decay Homo_sapiens 0 638
ENST00000534255 HGH1-004 retained_intron Homo_sapiens 0 333

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