C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier protein 52, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023220 Slc52a2-201 ENSMUSG00000022560 10090 + 15:76538943-76542130 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023220
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023220 7.338±1.99 10.439±1.93 1.405±0.00 6.231±3.33 5.691±1.66 10.040±1.70 2.124±0.88 14.084±6.35 3.484±1.69 4.898±2.82 1.035±0.20 13.001±5.96 7.363±3.61 4.683±2.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SS CIL_0007SS_0002 VISTA 15:76102685-76704351

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005887 ISS integral component of plasma membrane
GO:0032217 ISS riboflavin transporter activity
GO:0032218 ISS riboflavin transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000254853 SLC52A1-001 protein_coding Homo_sapiens 0 1105
ENST00000329994 SLC52A2-001 protein_coding Homo_sapiens 0 963
ENST00000402965 SLC52A2-003 protein_coding Homo_sapiens 0 963
ENST00000424747 SLC52A1-201 protein_coding Homo_sapiens 0 1105
ENST00000512825 SLC52A1-002 protein_coding Homo_sapiens 0 869
ENST00000526891 SLC52A2-013 processed_transcript Homo_sapiens 0 409
ENST00000527078 SLC52A2-009 protein_coding Homo_sapiens 0 963
ENST00000530047 SLC52A2-002 protein_coding Homo_sapiens 0 963
ENST00000532887 SLC52A2-004 protein_coding Homo_sapiens 0 963
ENST00000534725 SLC52A2-005 protein_coding Homo_sapiens 0 556
ENST00000573674 SLC52A1-003 retained_intron Homo_sapiens 0 931
ENST00000575919 SLC52A1-004 retained_intron Homo_sapiens 0 869

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