C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: minichromosome maintenance deficient 4 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023353 Mcm4-201 ENSMUSG00000022673 10090 - 16:15623897-15637400 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023353
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023353 6.053±3.75 7.545±2.29 5.114±0.29 6.104±2.96 6.821±2.83 5.346±0.96 1.760±0.30 2.441±0.19 15.480±18.49 6.867±0.86 1.036±0.14 10.326±1.76 13.262±9.28 1.804±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000462 CIL_000462_0002 CGP 16:15552677-15637400

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003678 IDA DNA helicase activity
GO:0003697 IPI single-stranded DNA binding
GO:0004003 ISS ATP-dependent DNA helicase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0006268 IPI DNA unwinding involved in DNA replication
GO:0006270 IEA DNA replication initiation
GO:0007049 IEA cell cycle
GO:0016020 IEA membrane
GO:0042555 ISS MCM complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262105 MCM4-001 protein_coding Homo_sapiens 0 3079
ENST00000517709 MCM4-013 retained_intron Homo_sapiens 0 1027
ENST00000518382 MCM4-015 nonsense_mediated_decay Homo_sapiens 0 453
ENST00000518680 MCM4-012 processed_transcript Homo_sapiens 0 680
ENST00000519138 MCM4-010 retained_intron Homo_sapiens 0 874
ENST00000519170 MCM4-009 protein_coding Homo_sapiens 0 756
ENST00000519470 MCM4-019 retained_intron Homo_sapiens 0 638
ENST00000520637 MCM4-011 protein_coding Homo_sapiens 0 830
ENST00000521151 MCM4-018 retained_intron Homo_sapiens 0 281
ENST00000521261 MCM4-017 retained_intron Homo_sapiens 0 436
ENST00000523853 MCM4-014 retained_intron Homo_sapiens 0 394
ENST00000523944 MCM4-004 protein_coding Homo_sapiens 0 3072

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