C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADP-ribosylation factor-like 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023405 Arl6-001 ENSMUSG00000022722 10090 - 16:59612949-59639167 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023405
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023405 1.590±0.00 3.306±0.78 2.912±0.87 0.462±0.05 0.821±0.23 0.509±0.27 3.660±0.73 0.412±0.27 1.959±0.34 0.803±0.31 1.860±1.32 0.977±0.38 3.797±1.72

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005525 ISS GTP binding
GO:0005543 ISS phospholipid binding
GO:0005737 IDA cytoplasm
GO:0005829 IDA cytosol
GO:0005879 ISS axonemal microtubule
GO:0005886 IEA plasma membrane
GO:0005929 IEA cilium
GO:0005930 ISS axoneme
GO:0006471 ISS protein ADP-ribosylation
GO:0006612 ISS protein targeting to membrane
GO:0007265 ISS Ras protein signal transduction
GO:0007420 IMP brain development
GO:0008589 IMP regulation of smoothened signaling pathway
GO:0010842 IMP retina layer formation
GO:0016020 IDA membrane
GO:0016055 IEA Wnt signaling pathway
GO:0030117 ISS membrane coat
GO:0034464 ISS BBSome
GO:0042384 ISS cilium assembly
GO:0045444 IEP fat cell differentiation
GO:0046872 IEA metal ion binding
GO:0046909 IMP intermembrane transport
GO:0051258 ISS protein polymerization
GO:0061512 IEA protein localization to cilium
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000335979 ARL6-201 protein_coding Homo_sapiens 0 802
ENST00000394206 ARL6-202 protein_coding Homo_sapiens 0 802
ENST00000462412 ARL6-004 protein_coding Homo_sapiens 0 473
ENST00000463745 ARL6-001 protein_coding Homo_sapiens 0 835
ENST00000493990 ARL6-002 nonsense_mediated_decay Homo_sapiens 0 730
ENST00000496713 ARL6-003 processed_transcript Homo_sapiens 0 643

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