C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 41a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023562 Tmem41a-201 ENSMUSG00000022856 10090 - 16:21934327-21947552 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023562
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023562 7.188±1.25 9.294±0.76 6.749±2.01 7.967±4.95 5.633±0.91 10.537±1.16 6.789±0.51 6.536±0.53 6.272±2.75 9.005±0.70 2.371±0.29 5.747±1.53 8.626±4.90 2.790±1.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ZT CIL_0008ZT_0002 VISTA 16:21809929-22410861
CIL_0006RB CIL_0006RB_0002 CGP 16:21891969-21947552
CIL_0006RC CIL_0006RC_0002 CGP 16:21934327-21995542

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000421852 TMEM41A-001 protein_coding Homo_sapiens 0 821
ENST00000467061 TMEM41A-004 retained_intron Homo_sapiens 0 211
ENST00000475480 TMEM41A-007 processed_transcript Homo_sapiens 0 658

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