C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023830 Nus1-001 ENSMUSG00000023068 10090 + 10:52417547-52440192 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023830
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023830 9.988±2.19 48.236±19.84 2.207±0.55 8.172±1.06 13.768±10.02 39.061±5.93 5.194±0.84 53.596±12.60 8.659±2.89 14.951±5.96 2.001±1.13 20.982±16.55 12.757±3.12 5.612±1.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005XP CIL_0005XP_0002 CGP 10:52417547-53111622

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005789 IEA endoplasmic reticulum membrane
GO:0006486 IEA protein glycosylation
GO:0008152 IEA metabolic process
GO:0016021 IEA integral component of membrane
GO:0016765 IEA transferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0030154 IEA cell differentiation
GO:0032367 IMP intracellular cholesterol transport
GO:0055092 IMP sterol homeostasis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000368494 NUS1-001 protein_coding Homo_sapiens 0 1659
ENST00000401550 NUS1P4-001 processed_pseudogene Homo_sapiens 0 571
ENST00000417358 NUS1P2-001 processed_pseudogene Homo_sapiens 0 953
ENST00000423502 NUS1P3-001 processed_pseudogene Homo_sapiens 0 887
ENST00000446295 NUS1P1-001 processed_pseudogene Homo_sapiens 0 1112

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