C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023911 Nagpa-001 ENSMUSG00000023143 10090 - 16:5195289-5204012 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023911
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023911 8.991±0.75 19.365±2.84 9.849±0.29 2.106±0.19 12.808±5.29 12.463±1.04 5.446±0.81 8.184±0.54 6.596±1.55 16.768±2.10 1.634±0.54 15.756±6.09 8.558±3.52 2.028±0.96

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00004S CIL_00004S_0002 CGP 16:5147109-5204012

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003944 IEA N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase activity
GO:0005794 IEA Golgi apparatus
GO:0006486 IEA protein glycosylation
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000312251 NAGPA-001 protein_coding Homo_sapiens 0 1373
ENST00000381955 NAGPA-007 protein_coding Homo_sapiens 0 1057
ENST00000561580 NAGPA-002 retained_intron Homo_sapiens 0 307
ENST00000562037 NAGPA-010 nonsense_mediated_decay Homo_sapiens 0 322
ENST00000562346 NAGPA-019 protein_coding Homo_sapiens 0 518
ENST00000562746 NAGPA-004 nonsense_mediated_decay Homo_sapiens 0 780
ENST00000563578 NAGPA-005 protein_coding Homo_sapiens 0 737
ENST00000564397 NAGPA-006 retained_intron Homo_sapiens 0 392
ENST00000564922 NAGPA-008 processed_transcript Homo_sapiens 0 305
ENST00000565876 NAGPA-011 nonsense_mediated_decay Homo_sapiens 0 274
ENST00000566137 NAGPA-016 retained_intron Homo_sapiens 0 392
ENST00000567739 NAGPA-013 retained_intron Homo_sapiens 0 512
ENST00000568202 NAGPA-003 retained_intron Homo_sapiens 0 573
ENST00000568528 NAGPA-015 processed_transcript Homo_sapiens 2e-33 147
ENST00000569296 NAGPA-012 nonsense_mediated_decay Homo_sapiens 0 499
ENST00000591478 NAGPA-020 processed_transcript Homo_sapiens 0 344

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