C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TBC1 domain family, member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000024717 Tbc1d5-201 ENSMUSG00000023923 10090 - 17:50733127-51179349 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000024717
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000024717 6.310±1.37 7.261±0.56 5.506±0.48 2.297±0.94 6.612±1.75 3.559±1.25 2.089±1.04 5.420±0.82 2.815±0.41 4.171±1.82 1.717±0.25 8.061±2.09 2.474±0.84 6.232±2.66

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004HQ CIL_0004HQ_0002 CGP 17:50733127-51833290

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005097 IEA Rab GTPase activator activity
GO:0005515 IEA protein binding
GO:0008150 ND biological_process
GO:0030904 IEA retromer complex
GO:0032851 IEA positive regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000253692 TBC1D5-001 protein_coding Homo_sapiens 0 1845
ENST00000412981 TBC1D5-009 nonsense_mediated_decay Homo_sapiens 0 361
ENST00000414318 TBC1D5-003 processed_transcript Homo_sapiens 0 935
ENST00000414349 TBC1D5-029 protein_coding Homo_sapiens 0 418
ENST00000415814 TBC1D5-020 protein_coding Homo_sapiens 0 678
ENST00000423331 TBC1D5-021 processed_transcript Homo_sapiens 1e-19 104
ENST00000425944 TBC1D5-016 protein_coding Homo_sapiens 0 496
ENST00000428355 TBC1D5-019 protein_coding Homo_sapiens 0 496
ENST00000429383 TBC1D5-002 protein_coding Homo_sapiens 0 1845
ENST00000429924 TBC1D5-005 protein_coding Homo_sapiens 0 1700
ENST00000430169 TBC1D5-010 nonsense_mediated_decay Homo_sapiens 0 322
ENST00000433533 TBC1D5-024 protein_coding Homo_sapiens 6e-22 108
ENST00000434420 TBC1D5-022 protein_coding Homo_sapiens 0 248
ENST00000443386 TBC1D5-014 processed_transcript Homo_sapiens 0 191
ENST00000443499 TBC1D5-012 processed_transcript Homo_sapiens 0 418
ENST00000444471 TBC1D5-023 protein_coding Homo_sapiens 9e-22 108
ENST00000444756 TBC1D5-013 processed_transcript Homo_sapiens 0 191
ENST00000445294 TBC1D5-011 protein_coding Homo_sapiens 0 497
ENST00000446818 TBC1D5-004 protein_coding Homo_sapiens 0 1845
ENST00000446863 TBC1D5-018 protein_coding Homo_sapiens 0 278
ENST00000452492 TBC1D5-008 nonsense_mediated_decay Homo_sapiens 0 418
ENST00000471679 TBC1D5-028 processed_transcript Homo_sapiens 2e-32 143
ENST00000481396 TBC1D5-025 processed_transcript Homo_sapiens 1e-19 104
ENST00000485432 TBC1D5-027 processed_transcript Homo_sapiens 2e-32 143
ENST00000486224 TBC1D5-015 processed_transcript Homo_sapiens 7e-22 108
ENST00000497531 TBC1D5-017 processed_transcript Homo_sapiens 0 348
ENST00000507877 TBC1D5-030 protein_coding Homo_sapiens 0 326

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