C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CCAAT/enhancer binding protein zeta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000024885 Cebpz-201 ENSMUSG00000024081 10090 - 17:78919006-78937070 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000024885
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000024885 1.583±0.32 1.005±0.50 1.635±0.16 6.427±5.58 1.001±0.21 0.631±0.17 1.254±0.30 1.729±0.54 1.994±1.08 1.960±0.80 4.533±0.61 4.440±3.73 14.729±14.71 3.948±4.87

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00085G CIL_00085G_0002 VISTA 17:78844758-79446183
CIL_0002IJ CIL_0002IJ_0002 CGP 17:78883938-78921037
CIL_0002II CIL_0002II_0002 CGP 17:78916499-78937070
CIL_0002IL CIL_0002IL_0002 CGP 17:78919006-78948052

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000978 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0044822 IEA poly(A) RNA binding
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000234170 CEBPZ-001 protein_coding Homo_sapiens 0 2931
ENST00000446769 CEBPZ-002 protein_coding Homo_sapiens 0 263
ENST00000619061 CEBPZ-201 protein_coding Homo_sapiens 0 2859

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