C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 3, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000024944 Slc3a1-201 ENSMUSG00000024131 10090 + 17:85028347-85064243 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonKidneyLiverENSMUST00000024944
Transcript ID Colon Kidney Liver
ENSMUST00000024944 5.189±1.76 120.993±20.18 8.461±1.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004BC CIL_0004BC_0002 CGP 17:84956741-85064243
CIL_0004B6 CIL_0004B6_0002 CGP 17:85028347-85090267

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005515 IPI protein binding
GO:0005743 IDA mitochondrial inner membrane
GO:0005774 IEA vacuolar membrane
GO:0005886 IEA plasma membrane
GO:0005887 IEA integral component of plasma membrane
GO:0005975 IEA carbohydrate metabolic process
GO:0006865 IEA amino acid transport
GO:0031526 IDA brush border membrane
GO:0043169 IEA cation binding
GO:0046982 IEA protein heterodimerization activity
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000260649 SLC3A1-001 protein_coding Homo_sapiens 0 1764
ENST00000409229 SLC3A1-005 protein_coding Homo_sapiens 0 1441
ENST00000409294 SLC3A1-009 protein_coding Homo_sapiens 0 394
ENST00000409380 SLC3A1-006 protein_coding Homo_sapiens 0 1118
ENST00000409387 SLC3A1-002 protein_coding Homo_sapiens 0 1448
ENST00000409740 SLC3A1-007 protein_coding Homo_sapiens 0 701
ENST00000409741 SLC3A1-004 protein_coding Homo_sapiens 0 1345
ENST00000611973 SLC3A1-201 protein_coding Homo_sapiens 0 1452

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