C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: meiosis specific with OB domains
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000024972 Meiob-201 ENSMUSG00000024155 10090 + 17:24804382-24839787 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000024972
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000024972 0.064±0.02 0.142±0.00 0.160±0.00 0.010±0.00 0.125±0.04 0.040±0.01 0.086±0.00 0.715±0.38 0.041±0.00 0.039±0.01 0.143±0.04 0.045±0.03 1.463±0.38

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000712 IMP resolution of meiotic recombination intermediates
GO:0000724 IMP double-strand break repair via homologous recombination
GO:0000738 IDA DNA catabolic process, exonucleolytic
GO:0003682 IDA chromatin binding
GO:0003697 IDA single-stranded DNA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005694 IEA chromosome
GO:0005737 IDA cytoplasm
GO:0007129 IMP synapsis
GO:0007140 IEP male meiosis
GO:0007141 IMP male meiosis I
GO:0007144 IMP female meiosis I
GO:0008310 IDA single-stranded DNA 3'-5' exodeoxyribonuclease activity
GO:0009566 IMP fertilization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000325962 MEIOB-003 protein_coding Homo_sapiens 0 1594
ENST00000382666 FAHD1-003 protein_coding Homo_sapiens 6e-38 163
ENST00000382668 FAHD1-002 protein_coding Homo_sapiens 7e-37 159
ENST00000397344 MEIOB-001 protein_coding Homo_sapiens 0 1389
ENST00000412554 MEIOB-201 protein_coding Homo_sapiens 0 1594
ENST00000460494 MEIOB-005 nonsense_mediated_decay Homo_sapiens 0 473
ENST00000470044 MEIOB-002 protein_coding Homo_sapiens 0 1447
ENST00000490154 MEIOB-006 retained_intron Homo_sapiens 0 375
ENST00000496541 MEIOB-004 protein_coding Homo_sapiens 0 809

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