C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: impact, RWD domain protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025290 Impact-201 ENSMUSG00000024423 10090 + 18:12972252-12992948 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025290
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025290 8.001±0.43 11.229±2.95 21.113±0.89 20.330±11.83 8.097±1.47 4.504±1.46 4.142±0.39 6.364±0.54 4.010±2.09 8.064±1.75 3.051±0.81 10.366±2.55 16.708±13.53 1.602±0.53

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005WR CIL_0005WR_0002 CGP 18:12755314-12992948
CIL_0008X5 CIL_0008X5_0002 VISTA 18:12809017-13410286
CIL_00091V CIL_00091V_0002 VISTA 18:12921433-13522700
CIL_0005WQ CIL_0005WQ_0002 CGP 18:12972252-13022882

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001933 IDA negative regulation of protein phosphorylation
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0006446 IDA regulation of translational initiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000284202 IMPACT-001 protein_coding Homo_sapiens 0 948
ENST00000578221 IMPACT-003 protein_coding Homo_sapiens 0 459
ENST00000580035 IMPACT-006 nonsense_mediated_decay Homo_sapiens 0 239
ENST00000580706 IMPACT-002 retained_intron Homo_sapiens 0 924
ENST00000581278 IMPACT-005 protein_coding Homo_sapiens 0 239
ENST00000585067 IMPACT-004 protein_coding Homo_sapiens 0 438

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