C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: slowmo homolog 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025411 Slmo1-201 ENSMUSG00000024530 10090 + 18:67464849-67480581 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025411
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025411 1.021±0.55 0.362±0.15 0.777±0.02 10.487±1.15 0.674±0.30 0.262±0.11 0.153±0.03 0.145±0.04 0.100±0.08 0.193±0.09 0.129±0.05 0.738±0.34 0.352±0.29 1.661±0.84

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZP CIL_0007ZP_0002 VISTA 18:67068230-67671525
CIL_0005DU CIL_0005DU_0002 CGP 18:67404767-67480581
CIL_00010Z CIL_00010Z_0002 CGP 18:67464849-67552777

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0005758 IBA mitochondrial intermembrane space
GO:0015914 IBA phospholipid transport
GO:1990050 IBA phosphatidic acid transporter activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000336990 SLMO1-001 protein_coding Homo_sapiens 0 549
ENST00000440960 SLMO1-201 protein_coding Homo_sapiens 0 549
ENST00000587735 SLMO1-003 protein_coding Homo_sapiens 0 307
ENST00000587862 SLMO1-008 protein_coding Homo_sapiens 0 451
ENST00000588729 SLMO1-004 protein_coding Homo_sapiens 0 324
ENST00000589565 SLMO1-006 nonsense_mediated_decay Homo_sapiens 0 261
ENST00000589952 SLMO1-007 protein_coding Homo_sapiens 0 431
ENST00000590956 SLMO1-005 protein_coding Homo_sapiens 0 307
ENST00000592149 SLMO1-002 protein_coding Homo_sapiens 0 486

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