C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thioredoxin-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025476 Txnl1-201 ENSMUSG00000024583 10090 - 18:63662801-63692359 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000025476
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000025476 12.105±1.47 97.700±4.60 11.212±0.04 11.752±8.74 21.302±11.73 23.205±2.74 9.137±3.88 12.100±2.82 21.580±8.27 15.652±3.01 30.462±8.63 28.980±6.13 4.898±0.65

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006OA CIL_0006OA_0002 CGP 18:63662801-63989760

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000502 IEA proteasome complex
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006662 IEA glycerol ether metabolic process
GO:0015035 IEA protein disulfide oxidoreductase activity
GO:0015036 IEA disulfide oxidoreductase activity
GO:0045454 IEA cell redox homeostasis
GO:0055114 IEA oxidation-reduction process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000217515 TXNL1-001 protein_coding Homo_sapiens 0 1587
ENST00000586262 TXNL1-004 protein_coding Homo_sapiens 0 1205
ENST00000587613 TXNL1-006 protein_coding Homo_sapiens 0 512
ENST00000587807 TXNL1-003 nonsense_mediated_decay Homo_sapiens 0 1238
ENST00000589329 TXNL1-005 protein_coding Homo_sapiens 9.99967e-42 174
ENST00000589931 TXNL1-008 protein_coding Homo_sapiens 0 265
ENST00000590954 TXNL1-002 protein_coding Homo_sapiens 0 1535

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