C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: asparaginyl-tRNA synthetase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025483 Nars-201 ENSMUSG00000024587 10090 - 18:64499665-64516557 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025483
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025483 17.536±2.67 15.941±2.01 23.276±0.90 41.190±22.76 16.356±1.41 21.156±1.70 12.778±2.31 23.487±2.12 41.477±22.13 20.401±3.00 33.480±2.16 25.181±13.89 67.160±28.96 8.390±2.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006O9 CIL_0006O9_0002 CGP 18:64456550-64516557
CIL_0006OE CIL_0006OE_0002 CGP 18:64499665-64661000

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0004816 IEA asparagine-tRNA ligase activity
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0006421 IEA asparaginyl-tRNA aminoacylation
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000256854 NARS-001 protein_coding Homo_sapiens 0 1888
ENST00000540592 NARS-003 nonsense_mediated_decay Homo_sapiens 0 510
ENST00000586807 NARS-004 nonsense_mediated_decay Homo_sapiens 0 966
ENST00000587194 NARS-008 protein_coding Homo_sapiens 0 510
ENST00000587366 NARS-012 retained_intron Homo_sapiens 0 322
ENST00000589001 NARS-011 retained_intron Homo_sapiens 4.00001e-40 169
ENST00000589314 NARS-010 retained_intron Homo_sapiens 0 193
ENST00000590123 NARS-009 nonsense_mediated_decay Homo_sapiens 1e-18 97
ENST00000591599 NARS-007 protein_coding Homo_sapiens 0 324

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