C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 138
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025568 Tmem138-201 ENSMUSG00000024666 10090 - 19:10570478-10577362 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025568
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025568 4.934±1.08 3.021±0.37 6.193±0.84 6.152±3.98 4.795±1.44 2.374±0.99 2.048±0.55 4.286±0.61 4.155±3.08 2.715±0.75 0.435±0.18 7.593±2.26 6.685±3.07 5.794±2.75

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WT CIL_0007WT_0002 VISTA 19:10121785-10724671

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005773 IEA vacuole
GO:0005929 ISS cilium
GO:0016021 IEA integral component of membrane
GO:0042384 ISS cilium assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000278826 TMEM138-001 protein_coding Homo_sapiens 0 767
ENST00000381787 TMEM138-011 protein_coding Homo_sapiens 0 497
ENST00000423772 TMEM138-008 retained_intron Homo_sapiens 0 486
ENST00000451389 TMEM138-010 processed_transcript Homo_sapiens 0 555
ENST00000507563 TMEM138-004 retained_intron Homo_sapiens 0 569
ENST00000534963 TMEM138-002 retained_intron Homo_sapiens 0 383
ENST00000540194 TMEM138-006 processed_transcript Homo_sapiens 0 499
ENST00000542946 TMEM138-009 protein_coding Homo_sapiens 0 521
ENST00000545420 TMEM138-007 processed_transcript Homo_sapiens 0 592

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