C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial ribosomal protein L21
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025743 Mrpl21-001 ENSMUSG00000024829 10090 + 19:3283060-3291201 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025743
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025743 6.668±0.00 24.190±0.42 17.845±5.39 13.550±5.69 13.725±4.91 12.263±1.75 12.640±3.01 17.555±13.91 7.016±0.48 27.209±2.60 20.063±7.27 28.565±14.73 5.608±1.16

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005739 IDA mitochondrion
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000344111 COX19-001 protein_coding Homo_sapiens 0.00007 55
ENST00000362034 MRPL21-001 protein_coding Homo_sapiens 0 612
ENST00000450904 MRPL21-008 protein_coding Homo_sapiens 0 547
ENST00000491703 ATP5O-002 retained_intron Homo_sapiens 0.00001 57
ENST00000536637 MRPL21-002 retained_intron Homo_sapiens 0 207
ENST00000541265 MRPL21-007 nonsense_mediated_decay Homo_sapiens 0 311
ENST00000541279 MRPL21-004 nonsense_mediated_decay Homo_sapiens 0 446
ENST00000542812 RP11-444B24.2-001 processed_pseudogene Homo_sapiens 0 285
ENST00000544567 MRPL21-003 nonsense_mediated_decay Homo_sapiens 0 366
ENST00000565125 MRPL21-006 nonsense_mediated_decay Homo_sapiens 0 385
ENST00000567045 MRPL21-005 protein_coding Homo_sapiens 0 503

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