C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB1B, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025804 Rab1b-201 ENSMUSG00000024870 10090 - 19:5099207-5106996 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025804
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025804 110.180±47.87 127.679±16.47 71.131±2.06 67.497±17.63 95.216±33.45 97.434±11.87 75.455±9.99 100.637±12.99 59.815±11.60 97.010±12.67 57.081±2.50 85.906±18.80 75.154±18.80 43.836±16.87

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005525 ISS GTP binding
GO:0005739 IDA mitochondrion
GO:0005793 IDA endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 IEA Golgi apparatus
GO:0006888 IEA ER to Golgi vesicle-mediated transport
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0019068 IEA virion assembly
GO:0034045 IEA pre-autophagosomal structure membrane
GO:0070062 IEA extracellular vesicular exosome
GO:1903020 IEA positive regulation of glycoprotein metabolic process
GO:2000785 IEA regulation of autophagic vacuole assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000311481 RAB1B-001 protein_coding Homo_sapiens 0 1530
ENST00000409159 RAB1C-001 processed_pseudogene Homo_sapiens 0 765
ENST00000527397 RAB1B-003 protein_coding Homo_sapiens 0 662
ENST00000615245 RAB1B-201 protein_coding Homo_sapiens 0 1524

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