C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peroxiredoxin 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025904 Prdx5-001 ENSMUSG00000024953 10090 - 19:6906706-6910106 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025904
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025904 80.803±32.74 47.828±2.56 111.414±58.71 54.619±5.99 62.244±6.05 99.418±9.76 164.500±15.61 286.134±54.71 56.066±24.83 38.990±3.43 63.139±6.18 34.446±2.79 63.242±7.91 41.999±2.45

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001016 IEA RNA polymerase III regulatory region DNA binding
GO:0004601 IEA peroxidase activity
GO:0005102 ISS receptor binding
GO:0005615 IEA extracellular space
GO:0005634 IEA nucleus
GO:0005737 ISS cytoplasm
GO:0005739 IDA mitochondrion
GO:0005777 IEA peroxisome
GO:0005782 ISS peroxisomal matrix
GO:0005829 IEA cytosol
GO:0006979 ISS response to oxidative stress
GO:0016209 ISS antioxidant activity
GO:0016480 IEA negative regulation of transcription from RNA polymerase III promoter
GO:0031410 IEA cytoplasmic vesicle
GO:0032967 IEA positive regulation of collagen biosynthetic process
GO:0034614 IEA cellular response to reactive oxygen species
GO:0042744 ISS hydrogen peroxide catabolic process
GO:0043027 IEA cysteine-type endopeptidase inhibitor activity involved in apoptotic process
GO:0043066 IEA negative regulation of apoptotic process
GO:0043154 IEA negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0046983 IEA protein dimerization activity
GO:0048471 IEA perinuclear region of cytoplasm
GO:0051354 IEA negative regulation of oxidoreductase activity
GO:0060785 IEA regulation of apoptosis involved in tissue homeostasis
GO:0070062 IEA extracellular vesicular exosome
GO:0070995 IEA NADPH oxidation
GO:0072541 IEA peroxynitrite reductase activity
GO:2001057 IEA reactive nitrogen species metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265462 PRDX5-001 protein_coding Homo_sapiens 0 608
ENST00000347941 PRDX5-003 protein_coding Homo_sapiens 0 267
ENST00000352435 PRDX5-002 protein_coding Homo_sapiens 0 267
ENST00000495472 RP11-451J24.1-001 processed_pseudogene Homo_sapiens 0 233

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