C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: stress-induced phosphoprotein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025918 Stip1-201 ENSMUSG00000024966 10090 - 19:7020696-7040026 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025918
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025918 24.844±7.17 27.174±6.48 35.965±1.22 82.912±20.33 17.900±4.15 21.427±3.72 26.938±1.27 23.802±2.75 46.918±29.67 15.199±2.15 26.630±1.52 50.511±20.15 137.598±98.66 31.816±7.85

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005O8 CIL_0005O8_0002 CGP 19:6998958-7040026

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005829 TAS cytosol
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000305218 STIP1-001 protein_coding Homo_sapiens 0 2278
ENST00000358794 STIP1-010 protein_coding Homo_sapiens 0 2084
ENST00000394563 STIP1P3-001 processed_pseudogene Homo_sapiens 0 1644
ENST00000536973 STIP1-002 nonsense_mediated_decay Homo_sapiens 0 499
ENST00000537479 STIP1-006 processed_transcript Homo_sapiens 0 505
ENST00000538497 STIP1-007 retained_intron Homo_sapiens 0 614
ENST00000538945 STIP1-003 protein_coding Homo_sapiens 0 1664
ENST00000540501 STIP1-009 processed_transcript Homo_sapiens 0 726
ENST00000540887 STIP1-008 protein_coding Homo_sapiens 0 453
ENST00000543847 STIP1-012 protein_coding Homo_sapiens 0 771
ENST00000544739 STIP1-005 processed_transcript Homo_sapiens 0 433

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