C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: caspase 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026062 Casp7-201 ENSMUSG00000025076 10090 + 19:56397129-56442344 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026062
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026062 7.022±1.32 2.321±0.92 6.276±0.59 2.639±1.30 5.251±1.34 39.801±4.05 2.907±0.94 3.907±0.68 8.753±1.79 9.596±0.92 1.338±0.38 5.486±1.75 3.778±1.03 0.763±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002GC CIL_0002GC_0002 CGP 19:56320035-56442344
CIL_0006OY CIL_0006OY_0002 CGP 19:56397129-56486729

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001836 IGI release of cytochrome c from mitochondria
GO:0004190 IDA aspartic-type endopeptidase activity
GO:0004197 IDA cysteine-type endopeptidase activity
GO:0005515 IPI protein binding
GO:0005737 IBA cytoplasm
GO:0005829 IEA cytosol
GO:0006508 RCA proteolysis
GO:0007507 IGI heart development
GO:0007568 IEA aging
GO:0008233 RCA peptidase activity
GO:0009411 IGI response to UV
GO:0016485 IDA protein processing
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0043525 IDA positive regulation of neuron apoptotic process
GO:0097153 IDA cysteine-type endopeptidase activity involved in apoptotic process
GO:0097194 IGI execution phase of apoptosis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000345633 CASP7-005 protein_coding Homo_sapiens 0 793
ENST00000369315 CASP7-002 protein_coding Homo_sapiens 0 793
ENST00000369318 CASP7-001 protein_coding Homo_sapiens 0 811
ENST00000369321 CASP7-201 protein_coding Homo_sapiens 0 791
ENST00000429617 CASP7-004 protein_coding Homo_sapiens 0 521
ENST00000452490 CASP7-202 protein_coding Homo_sapiens 0 791
ENST00000487232 CASP7-008 retained_intron Homo_sapiens 0 758
ENST00000621345 CASP7-204 protein_coding Homo_sapiens 0 793
ENST00000621607 CASP7-205 protein_coding Homo_sapiens 0 793

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