C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polymerase (DNA directed), lambda
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026239 Poll-201 ENSMUSG00000025218 10090 - 19:45552275-45560531 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026239
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026239 4.115±0.97 2.881±0.56 4.080±0.34 3.632±1.12 3.778±1.54 2.921±0.76 2.966±0.66 4.770±0.92 2.799±0.51 3.618±0.64 6.393±0.39 5.077±1.75 2.759±0.50 25.181±9.70

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZR CIL_0007ZR_0002 VISTA 19:45042853-45643685
CIL_00089J CIL_00089J_0002 VISTA 19:45175437-45776961
CIL_000942 CIL_000942_0002 VISTA 19:45193585-45794869
CIL_00099F CIL_00099F_0002 VISTA 19:45434459-46035623
CIL_00099E CIL_00099E_0002 VISTA 19:45446900-46047683

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003887 IDA DNA-directed DNA polymerase activity
GO:0005634 IEA nucleus
GO:0006260 IEA DNA replication
GO:0006287 ISA base-excision repair, gap-filling
GO:0006289 ISS nucleotide-excision repair
GO:0016829 IEA lyase activity
GO:0046872 IEA metal ion binding
GO:0071897 IEA DNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000299206 POLL-005 protein_coding Homo_sapiens 0 1692
ENST00000339310 POLL-010 protein_coding Homo_sapiens 0 939
ENST00000370162 POLL-201 protein_coding Homo_sapiens 0 1692
ENST00000370168 POLL-013 protein_coding Homo_sapiens 0 713
ENST00000370169 POLL-008 protein_coding Homo_sapiens 0 1692
ENST00000370172 POLL-012 protein_coding Homo_sapiens 0 1596
ENST00000415897 POLL-004 protein_coding Homo_sapiens 0 778
ENST00000426919 POLL-001 protein_coding Homo_sapiens 0 749
ENST00000429502 POLL-009 protein_coding Homo_sapiens 0 664
ENST00000454524 POLL-003 protein_coding Homo_sapiens 0 311
ENST00000463515 POLL-014 processed_transcript Homo_sapiens 0 599
ENST00000470140 POLL-011 processed_transcript Homo_sapiens 0 514
ENST00000485369 POLL-007 processed_transcript Homo_sapiens 0 863

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