C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubulin, gamma complex associated protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026547 Tubgcp2-201 ENSMUSG00000025474 10090 - 7:139995955-140036350 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026547
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026547 6.500±4.68 6.539±2.25 12.477±1.01 21.918±9.45 3.221±1.30 4.277±1.51 1.221±0.00 1.776±0.35 9.509±4.84 5.561±3.63 5.845±0.68 11.804±5.41 11.777±2.95 5.851±2.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000479 CIL_000479_0003 CGP 7:139978932-140036350
CIL_0000B9 CIL_0000B9_0002 CGP 7:139995955-140040605

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000226 IEA microtubule cytoskeleton organization
GO:0000922 IEA spindle pole
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005813 IEA centrosome
GO:0005874 IEA microtubule
GO:0008150 ND biological_process
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000252936 TUBGCP2-001 protein_coding Homo_sapiens 0 2972
ENST00000368562 TUBGCP2-003 protein_coding Homo_sapiens 0 1596
ENST00000368563 TUBGCP2-201 protein_coding Homo_sapiens 0 2972
ENST00000417178 TUBGCP2-202 protein_coding Homo_sapiens 0 2767
ENST00000470829 TUBGCP2-007 processed_transcript Homo_sapiens 0 525
ENST00000480198 TUBGCP2-008 retained_intron Homo_sapiens 0 209
ENST00000482278 TUBGCP2-002 nonsense_mediated_decay Homo_sapiens 0 2516
ENST00000487796 TUBGCP2-006 nonsense_mediated_decay Homo_sapiens 0 496
ENST00000543663 TUBGCP2-203 protein_coding Homo_sapiens 0 2263

Loading