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Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: shisa family member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026737 Shisa5-001 ENSMUSG00000025647 10090 + 9:109038585-109057724 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026737
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026737 49.534±4.56 85.682±13.07 39.174±0.29 5.029±2.01 203.416±19.26 105.356±25.36 20.372±5.94 65.266±17.40 11.485±5.93 127.993±21.64 2.902±1.35 77.743±22.41 44.799±24.01 2.550±1.23

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004871 IEA signal transducer activity
GO:0005515 IEA protein binding
GO:0005635 IDA nuclear envelope
GO:0005783 IDA endoplasmic reticulum
GO:0016021 IEA integral component of membrane
GO:0042771 IDA intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
GO:0043123 IEA positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0050699 IEA WW domain binding
GO:0070062 IEA extracellular vesicular exosome
GO:0072332 IMP intrinsic apoptotic signaling pathway by p53 class mediator

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296444 SHISA5-001 protein_coding Homo_sapiens 0 383
ENST00000417841 SHISA5-017 protein_coding Homo_sapiens 2.00386e-43 180
ENST00000417962 SHISA5-006 nonsense_mediated_decay Homo_sapiens 0 357
ENST00000424965 SHISA5-016 nonsense_mediated_decay Homo_sapiens 0 195
ENST00000426002 SHISA5-002 protein_coding Homo_sapiens 0 302
ENST00000442747 SHISA5-007 protein_coding Homo_sapiens 0 357
ENST00000443308 SHISA5-009 protein_coding Homo_sapiens 0 320
ENST00000444115 SHISA5-012 protein_coding Homo_sapiens 0 357
ENST00000455783 TMEM229A-001 protein_coding Homo_sapiens 0.000009 57
ENST00000460758 SHISA5-011 retained_intron Homo_sapiens 2e-26 124
ENST00000465449 SHISA5-004 processed_transcript Homo_sapiens 0 300
ENST00000466424 SHISA5-013 processed_transcript Homo_sapiens 0 294
ENST00000486344 SHISA5-015 processed_transcript Homo_sapiens 0 315
ENST00000494854 SHISA5-003 retained_intron Homo_sapiens 0 298
ENST00000497863 SHISA5-014 retained_intron Homo_sapiens 1e-26 124
ENST00000612611 SHISA5-201 protein_coding Homo_sapiens 0 302
ENST00000619810 SHISA5-202 protein_coding Homo_sapiens 0 357

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