C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: complexin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026985 Cplx2-001 ENSMUSG00000025867 10090 + 13:54371349-54383917 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026985
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026985 3.004±0.73 10.972±1.65 1.641±0.64 51.758±44.74 2.587±1.19 2.616±2.13 0.730±0.43 5.032±1.62 0.876±0.23 1.858±0.89 0.148±0.07 11.932±7.09 0.486±0.24 0.278±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001QU CIL_0001QU_0002 CGP 13:54192129-54383917
CIL_0006ZE CIL_0006ZE_0002 CGP 13:54371349-54468849

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000149 IEA SNARE binding
GO:0007399 IEA nervous system development
GO:0016079 IEA synaptic vesicle exocytosis
GO:0017075 ISO syntaxin-1 binding
GO:0030154 IEA cell differentiation
GO:0030425 ISO dendrite
GO:0031201 IEA SNARE complex
GO:0031915 IDA positive regulation of synaptic plasticity
GO:0042629 IEA mast cell granule
GO:0043025 ISO neuronal cell body
GO:0043303 IEA mast cell degranulation
GO:0045202 ISO synapse
GO:0048306 IEA calcium-dependent protein binding
GO:0070033 IEA synaptobrevin 2-SNAP-25-syntaxin-1a-complexin II complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304062 CPLX1-001 protein_coding Homo_sapiens 0 348
ENST00000359546 CPLX2-001 protein_coding Homo_sapiens 0 697
ENST00000393745 CPLX2-003 protein_coding Homo_sapiens 0 813
ENST00000502265 CPLX2-008 protein_coding Homo_sapiens 0 375
ENST00000504062 CPLX1-004 protein_coding Homo_sapiens 0 283
ENST00000505203 CPLX1-003 protein_coding Homo_sapiens 1e-35 156
ENST00000506404 CPLX1-005 retained_intron Homo_sapiens 0 327
ENST00000509837 CPLX2-011 protein_coding Homo_sapiens 0 516
ENST00000512824 CPLX2-004 protein_coding Homo_sapiens 0 429
ENST00000514150 CPLX2-007 protein_coding Homo_sapiens 0 558
ENST00000515025 CPLX2-005 protein_coding Homo_sapiens 0 220
ENST00000515094 CPLX2-006 protein_coding Homo_sapiens 0 638

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