C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acyl-Coenzyme A dehydrogenase, long-chain
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027153 Acadl-001 ENSMUSG00000026003 10090 - 1:66830839-66863277 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027153
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027153 25.813±5.37 31.297±5.17 36.523±14.53 4.827±1.48 31.458±4.66 12.465±2.83 109.460±23.12 45.047±8.86 31.392±10.52 14.846±3.30 55.256±13.61 22.903±22.98 17.589±8.16 3.694±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002J3 CIL_0002J3_0002 CGP 1:66719248-66863277

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000062 IEA fatty-acyl-CoA binding
GO:0001659 IMP temperature homeostasis
GO:0004466 IMP long-chain-acyl-CoA dehydrogenase activity
GO:0005737 IEA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005759 IEA mitochondrial matrix
GO:0016401 IMP palmitoyl-CoA oxidase activity
GO:0019254 IMP carnitine metabolic process, CoA-linked
GO:0031966 IEA mitochondrial membrane
GO:0033539 IMP fatty acid beta-oxidation using acyl-CoA dehydrogenase
GO:0042413 IMP carnitine catabolic process
GO:0042758 IEA long-chain fatty acid catabolic process
GO:0044242 IMP cellular lipid catabolic process
GO:0045717 IMP negative regulation of fatty acid biosynthetic process
GO:0046322 IMP negative regulation of fatty acid oxidation
GO:0051289 IEA protein homotetramerization
GO:0055114 IMP oxidation-reduction process
GO:0090181 IMP regulation of cholesterol metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000126978 acadl-001 protein_coding Danio_rerio 0 243
ENST00000233710 ACADL-001 protein_coding Homo_sapiens 0 1306
ENST00000482523 ACADL-003 retained_intron Homo_sapiens 0 244
ENST00000498120 ACADL-002 retained_intron Homo_sapiens 0 333

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