C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027289 Vwa3b-201 ENSMUSG00000026115 10090 + 1:37153844-37187604 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENSMUST00000027289
Transcript ID Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000027289 0.026±0.00 0.059±0.01 0.028±0.00 0.033±0.00 0.033±0.01 0.018±0.01 0.126±0.04 0.015±0.01 13.547±6.07

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000409460 VWA3B-004 retained_intron Homo_sapiens 0 1775
ENST00000416277 VWA3B-005 nonsense_mediated_decay Homo_sapiens 0 595
ENST00000422503 VWA3B-021 nonsense_mediated_decay Homo_sapiens 0 1114
ENST00000432242 VWA3B-001 nonsense_mediated_decay Homo_sapiens 0 621
ENST00000433678 VWA3B-002 nonsense_mediated_decay Homo_sapiens 0 1583
ENST00000448638 VWA3B-003 nonsense_mediated_decay Homo_sapiens 0 595
ENST00000465555 VWA3B-009 protein_coding Homo_sapiens 1e-30 135
ENST00000466852 VWA3B-017 retained_intron Homo_sapiens 0 405
ENST00000473149 VWA3B-007 protein_coding Homo_sapiens 0 929
ENST00000477737 VWA3B-020 protein_coding Homo_sapiens 0 1775
ENST00000489630 VWA3B-008 nonsense_mediated_decay Homo_sapiens 0 929
ENST00000489968 VWA3B-016 processed_transcript Homo_sapiens 0 481
ENST00000490947 VWA3B-010 processed_transcript Homo_sapiens 0 808
ENST00000495571 VWA3B-006 nonsense_mediated_decay Homo_sapiens 0 929
ENST00000614454 VWA3B-201 protein_coding Homo_sapiens 0 808

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