C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: insulin-like growth factor binding protein 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027377 Igfbp5-001 ENSMUSG00000026185 10090 - 1:72857932-72874884 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027377
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027377 73.990±58.15 20.296±1.79 32.429±3.55 17.286±3.85 84.862±24.15 7.700±5.80 31.517±4.05 79.913±41.74 1.572±1.41 61.408±0.96 106.774±22.44 54.509±28.95 3.949±1.92 0.902±0.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000AM CIL_0000AM_0003 CGP 1:72824503-72874884
CIL_0005MA CIL_0005MA_0002 CGP 1:72857932-73015909

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001558 IGI regulation of cell growth
GO:0001649 IEP osteoblast differentiation
GO:0001968 IDA fibronectin binding
GO:0005515 IEA protein binding
GO:0005520 IPI insulin-like growth factor binding
GO:0006006 IMP glucose metabolic process
GO:0010906 IGI regulation of glucose metabolic process
GO:0014912 IEA negative regulation of smooth muscle cell migration
GO:0016942 IC insulin-like growth factor binding protein complex
GO:0017148 IEA negative regulation of translation
GO:0030336 IEA negative regulation of cell migration
GO:0031069 IMP hair follicle morphogenesis
GO:0031994 IEA insulin-like growth factor I binding
GO:0035556 IEA intracellular signal transduction
GO:0040008 IGI regulation of growth
GO:0042593 IMP glucose homeostasis
GO:0043568 IGI positive regulation of insulin-like growth factor receptor signaling pathway
GO:0043569 IMP negative regulation of insulin-like growth factor receptor signaling pathway
GO:0044342 IGI type B pancreatic cell proliferation
GO:0045668 IGI negative regulation of osteoblast differentiation
GO:0048630 IEA skeletal muscle tissue growth
GO:0048662 IEA negative regulation of smooth muscle cell proliferation
GO:0051146 IGI striated muscle cell differentiation
GO:0051897 IMP positive regulation of protein kinase B signaling
GO:0060056 IMP mammary gland involution
GO:0071320 IEA cellular response to cAMP
GO:0071407 IEA cellular response to organic cyclic compound

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000233813 IGFBP5-001 protein_coding Homo_sapiens 0 1519
ENST00000449583 IGFBP5-003 protein_coding Homo_sapiens 0 429
ENST00000486341 IGFBP5-004 retained_intron Homo_sapiens 0 619

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