C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cysteine and glycine-rich protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027677 Csrp1-001 ENSMUSG00000026421 10090 + 1:135729147-135752232 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027677
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027677 244.790±114.23 27.393±7.86 2024.110±125.13 28.392±25.07 86.909±26.35 287.797±36.69 41.294±2.83 49.901±10.04 21.601±15.42 353.847±8.30 10.541±1.33 221.072±93.51 145.888±63.69 16.601±9.82

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0008270 IEA zinc ion binding
GO:0015629 TAS actin cytoskeleton
GO:0030036 TAS actin cytoskeleton organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000340006 CSRP1-201 protein_coding Homo_sapiens 0 970
ENST00000367306 CSRP1-001 protein_coding Homo_sapiens 0 970
ENST00000458271 CSRP1-005 processed_transcript Homo_sapiens 0 595
ENST00000471596 CSRP1-003 retained_intron Homo_sapiens 0 409
ENST00000481851 CSRP1-002 retained_intron Homo_sapiens 0 193
ENST00000524951 CSRP1-012 protein_coding Homo_sapiens 0 719
ENST00000526317 CSRP1-014 processed_transcript Homo_sapiens 0 228
ENST00000526723 CSRP1-013 protein_coding Homo_sapiens 0 571
ENST00000527573 CSRP1-017 processed_transcript Homo_sapiens 0 595
ENST00000527662 CSRP1-008 retained_intron Homo_sapiens 0 704
ENST00000529975 CSRP1-016 processed_transcript Homo_sapiens 0 562
ENST00000530120 CSRP1-011 processed_transcript Homo_sapiens 0 638
ENST00000531916 CSRP1-018 protein_coding Homo_sapiens 0 647
ENST00000532313 CSRP1-007 retained_intron Homo_sapiens 0 556
ENST00000532460 CSRP1-004 protein_coding Homo_sapiens 0 870
ENST00000533188 CSRP1-010 retained_intron Homo_sapiens 0 403
ENST00000533402 CSRP1-009 retained_intron Homo_sapiens 0 305
ENST00000533432 CSRP1-006 protein_coding Homo_sapiens 0 869

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