C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ras association (RalGDS/AF-6) domain family member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027688 Rassf5-001 ENSMUSG00000026430 10090 - 1:131176410-131245258 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000027688
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000027688 4.867±2.52 3.219±0.62 9.147±0.70 2.358±0.73 2.990±0.37 1.652±0.00 2.198±0.43 3.249±0.60 4.525±1.37 6.899±1.67 3.781±0.88 1.306±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004IR CIL_0004IR_0002 CGP 1:131176410-131279606

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0005874 IEA microtubule
GO:0006915 IEA apoptotic process
GO:0008285 IMP negative regulation of cell proliferation
GO:0031398 IMP positive regulation of protein ubiquitination
GO:0035556 IEA intracellular signal transduction
GO:0046872 IEA metal ion binding
GO:1900180 IMP regulation of protein localization to nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000577571 RASSF5-004 protein_coding Homo_sapiens 0 981
ENST00000579436 RASSF5-001 protein_coding Homo_sapiens 0 1435
ENST00000579942 RASSF5-006 retained_intron Homo_sapiens 0 442
ENST00000580449 RASSF5-002 protein_coding Homo_sapiens 0 1000
ENST00000581503 RASSF5-003 protein_coding Homo_sapiens 0 990
ENST00000581888 RASSF5-005 protein_coding Homo_sapiens 0 688
ENST00000605653 RASSF5-008 retained_intron Homo_sapiens 0 551

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