C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: suppressor of variegation 3-9 homolog 2 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027956 Suv39h2-001 ENSMUSG00000026646 10090 - 2:3455815-3475031 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverMuscleOvaryPlacentaTestisENSMUST00000027956
Transcript ID Brain Liver Muscle Ovary Placenta Testis
ENSMUST00000027956 1.462±0.01 1.666±0.32 0.117±0.00 0.490±0.00 1.477±0.52 1.842±0.18

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000775 IEA chromosome, centromeric region
GO:0000785 ISS chromatin
GO:0000976 IDA transcription regulatory region sequence-specific DNA binding
GO:0003682 IDA chromatin binding
GO:0005515 IPI protein binding
GO:0005720 IDA nuclear heterochromatin
GO:0006333 ISS chromatin assembly or disassembly
GO:0006338 ISS chromatin remodeling
GO:0006351 IEA transcription, DNA-templated
GO:0007140 IEP male meiosis
GO:0008168 IDA methyltransferase activity
GO:0008270 IEA zinc ion binding
GO:0008276 IDA protein methyltransferase activity
GO:0018024 IDA histone-lysine N-methyltransferase activity
GO:0030154 IEA cell differentiation
GO:0034968 IGI histone lysine methylation
GO:0036123 IMP histone H3-K9 dimethylation
GO:0036124 IMP histone H3-K9 trimethylation
GO:0042754 IMP negative regulation of circadian rhythm
GO:0045892 IMP negative regulation of transcription, DNA-templated
GO:0046974 ISS histone methyltransferase activity (H3-K9 specific)
GO:0048511 IEA rhythmic process
GO:0051567 IGI histone H3-K9 methylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000313519 SUV39H2-008 protein_coding Homo_sapiens 0 1147
ENST00000354919 SUV39H2-002 protein_coding Homo_sapiens 0 1386
ENST00000358298 SUV39H2-001 protein_coding Homo_sapiens 0 252
ENST00000378289 DCLRE1C-008 protein_coding Homo_sapiens 0 231
ENST00000378325 SUV39H2-006 protein_coding Homo_sapiens 0 351
ENST00000378331 SUV39H2-007 nonsense_mediated_decay Homo_sapiens 0 1147
ENST00000412254 SUV39H2-005 protein_coding Homo_sapiens 0 442
ENST00000420416 SUV39H2-004 protein_coding Homo_sapiens 0 662
ENST00000433779 SUV39H2-003 protein_coding Homo_sapiens 0 351
ENST00000604538 RP11-301G19.2-001 processed_pseudogene Homo_sapiens 0 745

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