C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: regulator of G-protein signaling 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027991 Rgs4-001 ENSMUSG00000038530 10090 - 1:169741477-169747642 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027991
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027991 3.259±0.99 2.877±1.68 4.322±0.65 20.608±17.63 1.667±0.68 1.553±0.67 4.818±0.92 0.814±0.24 0.192±0.14 3.211±1.40 2.180±0.45 1.486±0.66 0.554±0.33 0.239±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009CL CIL_0009CL_0002 VISTA 1:169176672-169778007
CIL_0004MJ CIL_0004MJ_0002 CGP 1:169655501-169747642

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001965 IEA G-protein alpha-subunit binding
GO:0005096 IBA GTPase activator activity
GO:0005737 IBA cytoplasm
GO:0005829 IEA cytosol
GO:0005886 IBA plasma membrane
GO:0007186 TAS G-protein coupled receptor signaling pathway
GO:0016020 IEA membrane
GO:0038032 IEA termination of G-protein coupled receptor signaling pathway
GO:0043234 IEA protein complex
GO:0043547 IEA positive regulation of GTPase activity
GO:0045744 IEA negative regulation of G-protein coupled receptor protein signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000367906 RGS4-002 protein_coding Homo_sapiens 0 891
ENST00000367908 RGS4-003 protein_coding Homo_sapiens 0 590
ENST00000367909 RGS4-001 protein_coding Homo_sapiens 0 1085
ENST00000421743 RGS4-005 protein_coding Homo_sapiens 0 1085
ENST00000491263 RGS4-004 processed_transcript Homo_sapiens 0 593
ENST00000527809 RGS4-007 protein_coding Homo_sapiens 0 878
ENST00000528938 RGS4-009 protein_coding Homo_sapiens 0 549

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